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    Immune infiltration and prognostic and diagnostic use of LGALS4 in colon adenocarcinoma and bladder urothelial carcinoma.

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    Author
    Acharjee, Animesh
    Agarwal, Prasoon
    Nash, Katrina
    Bano, Subia
    Rahman, Taufiq
    Gkoutos, Georgios V
    Publication date
    2021-10-15
    Subject
    Pharmacology
    Surgery
    Oncology. Pathology.
    
    Metadata
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    Abstract
    Colon adenocarcinoma (COAD) is a common tumor of the gastrointestinal tract with a high mortality rate. Current research has identified many genes associated with immune infiltration that play a vital role in the development of COAD. In this study, we analysed the prognostic and diagnostic features of such immune-related genes in the context of colonic adenocarcinoma (COAD). We analysed 17 overlapping gene expression profiles of COAD and healthy samples obtained from TCGA-COAD and public single-cell sequencing resources, to identify potential therapeutic COAD targets. We evaluated the abundance of immune infiltration with those genes using the TIMER (Tumor Immune Estimation Resource) deconvolution method. Subsequently, we developed predictive and survival models to assess the prognostic value of these genes. The LGALS4 (Galectin-4) gene was found to be significantly (P<0.05) downregulated in COAD and bladder urothelial carcinoma (BLCA) compared to healthy samples. We identified LGALS4 as a prognostic and diagnostic marker for multiple cancer types, including COAD and BLCA. Our analysis reveals a series of novel candidate drug targets, as well as candidate molecular markers, that may explain the pathogenesis of COAD and BLCA. LGALS4 gene is associated with multiple cancer types and is a possible prognostic, as well as diagnostic, marker of COAD and BLCA.
    Citation
    Acharjee A, Agarwal P, Nash K, Bano S, Rahman T, Gkoutos GV. Immune infiltration and prognostic and diagnostic use of LGALS4 in colon adenocarcinoma and bladder urothelial carcinoma. Am J Transl Res. 2021 Oct 15;13(10):11353-11363
    Type
    Article
    Handle
    http://hdl.handle.net/20.500.14200/4954
    Additional Links
    http://www.ajtr.org
    PMID
    34786063
    Journal
    American Journal of Translational Research
    Publisher
    e-Century
    Collections
    Gastroenterology

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